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hematological · Mechanism Report

Does SH2B3 rs3184504 alter blood-cell traits and hematopoietic signaling?

SH2B3 rs3184504 is associated with altered blood-cell traits and enhanced hematopoietic signaling.

PlausibleJuly 8, 202613 Sources

Reasoning Paths

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This is what AI claimed

SH2B3 rs3184504 is associated with altered blood-cell traits and hematopoietic signaling.

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Evidence state

  • ●EstablishedStrong, replicated evidence.
  • ◐ModerateEvidence-informed; limited or moderate.
  • ◇PlausibleMechanistically coherent, not established.
  • ✕UnsupportedTested and not supported — link breaks.
  • ?MissingNo evidence either way — untested.

Node shapes

  • BiomarkerA measurable state — a lab value, hormone, or genetic factor.
  • ProcessA biological process, pathway, or mechanism step.
  • ConditionA condition, exposure, intervention, or symptom.
  • OutcomeThe endpoint the claim leads to.

Executive summary

The claim says this SH2B3 variant is linked to changes in red cell, white cell, and platelet measures. The mechanism frames it as a hypomorphic change that reduces LNK’s normal inhibitory control over cytokine receptor signaling, allowing stronger JAK2/JAK-STAT activity in hematopoiesis. It also places the variant in the context of increased susceptibility to myeloproliferative neoplasms.

Verified conclusion

The SH2B3 gene encodes LNK, an intracellular adaptor protein that serves as a critical negative regulator of cytokine receptor signaling in hematopoietic stem and progenitor cells.

Mechanistic pathways

  • The rs3184504 (p.R262W) variant is a well-characterized missense single nucleotide polymorphism that acts as a hypomorphic allele, resulting in a protein with reduced LNK function.
  • Under normal physiological conditions, LNK binds to JAK2 and cytokine receptors—such as the erythropoietin receptor (EpoR) and the thrombopoietin receptor (MPL)—to attenuate downstream JAK-STAT signaling.
  • The reduction in LNK function associated with the rs3184504 variant weakens this regulatory brake, leading to enhanced, hyper-responsive JAK2-dependent and JAK-STAT signaling in response to hematopoietic cytokines.

Blood-cell traits and clinical implications

  • Multiple genome-wide association studies (GWAS) robustly demonstrate that the rs3184504 variant is associated with altered hematological profiles, including elevated platelet counts (driven by enhanced megakaryopoiesis), higher white blood cell and eosinophil counts, and elevated red blood cell parameters, such as hemoglobin and hematocrit.
  • Beyond driving baseline blood-cell trait fluctuations, the altered signaling environment created by this hypomorphic allele acts as a genetic modifier that increases susceptibility to myeloproliferative neoplasms, particularly JAK2 V617F-positive polycythemia vera.

Bottom line

  • The SH2B3 rs3184504 (R262W) variant is a functional hypomorphic allele that reduces LNK-mediated inhibition of JAK2 and MPL signaling, resulting in elevated red blood cell, white blood cell, and platelet counts, while increasing genetic susceptibility to myeloproliferative neoplasms.

References

  1. LNK/SH2B3 Loss of Function Promotes Atherosclerosis and ... — ahajournals.org ↗
  2. SH2B3 Gene - Ma'ayan Lab – Computational Systems Biology — maayanlab.cloud ↗
  3. The autoimmune risk R262W variant of the adaptor SH2B3 improves ... — pmc.ncbi.nlm.nih.gov ↗
  4. Lnk inhibits erythropoiesis and Epo-dependent JAK2 activation and ... — pmc.ncbi.nlm.nih.gov ↗
  5. SH2B3 - an overview | ScienceDirect Topics — sciencedirect.com ↗
  6. A Single Nucleotide Polymorphism in SH2B3/LNK Promotes Hypertension Development and Renal Damage — pmc.ncbi.nlm.nih.gov ↗
  7. rs3184504 - Personalized Report - Infinome — infino.me ↗
  8. Variant: rs3184504 - GWAS Catalog — ebi.ac.uk ↗
  9. The SH2B3 and KCNK5 loci may be implicated in regulation of ... — sciencedirect.com ↗
  10. [PDF] SH2B3 (LNK) rs3184504 polymorphism is correlated with JAK2 ... — rrml.ro ↗
  11. A genome-wide meta-analysis identifies 22 loci associated with ... — dnagenics.com ↗
  12. The Longevity Associated Sh2b3 (LNK) Genetic Variant: Selected Aging Phenotypes in 379,758 Subjects. — pmc.ncbi.nlm.nih.gov ↗
  13. SH2B3 (LNK) rs3184504 polymorphism is correlated with JAK2... — reference-global.com ↗

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