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nutrition · Mechanism Report

Is the CYP2R1 rs10741657 G allele associated with lower 25-hydroxyvitamin D?

The CYP2R1 rs10741657 G allele is associated with lower circulating 25-hydroxyvitamin D.

PlausibleNovember 6, 20266 Sources

Reasoning Paths

Each route from condition to outcome carries a support score — the product of its edge weights. Select one to isolate it on the figure.

This is what AI claimed

The CYP2R1 rs10741657 G allele is associated with lower circulating 25-hydroxyvitamin D, consistent with less efficient hepatic vitamin D 25-hydroxylation.

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1 of 2 paths supported
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How to read the figure

Evidence state

  • ●EstablishedStrong, replicated evidence.
  • ◐ModerateEvidence-informed; limited or moderate.
  • ◇PlausibleMechanistically coherent, not established.
  • ✕UnsupportedTested and not supported — link breaks.
  • ?MissingNo evidence either way — untested.

Node shapes

  • BiomarkerA measurable state — a lab value, hormone, or genetic factor.
  • ProcessA biological process, pathway, or mechanism step.
  • ConditionA condition, exposure, intervention, or symptom.
  • OutcomeThe endpoint the claim leads to.

Executive summary

The claim describes a genetic marker linked to slightly lower measured vitamin D status. The mechanism framing suggests this may reflect less efficient hepatic 25-hydroxylation, though that process is presented as plausible rather than directly proven for this variant. Overall, the effect is described as a population-level association rather than a diagnosis of deficiency.

Verified conclusion

CYP2R1 rs10741657 is a common genetic marker relevant to vitamin D biology. For a 69-year-old woman, its main implication is a modest population-level predisposition toward lower measured 25-hydroxyvitamin D [25(OH)D], not a diagnosis of deficiency or a substitute for laboratory assessment.

Clinical association

  • The G allele is supported as being associated with lower circulating 25(OH)D. A meta-analysis of 16 studies including 52,417 participants found lower 25(OH)D among G-allele carriers, including GG versus AA, and modestly higher odds of vitamin D deficiency (OR 1.09, 95% CI 1.03–1.15).
  • Cohort findings generally align with this direction; in a pregnancy supplementation study, each additional G allele was associated with 5.2 nmol/L lower achieved 25(OH)D after cholecalciferol. However, genotype effects and supplementation responses varied across populations and settings.

Mechanistic interpretation

  • CYP2R1 encodes a major hepatic enzyme that converts vitamin D₂ and D₃ into 25(OH)D, the principal circulating marker of vitamin D status. Reduced efficiency of this step would be expected to lower serum 25(OH)D.
  • Rare CYP2R1 coding variants with reduced enzyme activity impair 25(OH)D production after vitamin D dosing, and hepatic CYP2R1 expression correlates with serum 25(OH)D₃ in liver-biopsy research.
  • For rs10741657 specifically, reduced hepatic 25-hydroxylation remains plausible rather than directly proven: it is noncoding, and there are no allele-specific liver expression, protein, or enzymatic-function data establishing that the G allele reduces CYP2R1 activity.

Bottom line

  • rs10741657 G is a credible marker of slightly lower 25(OH)D, with a biologically coherent but unproven hepatic mechanism. Clinical decisions should be guided by measured 25(OH)D and individual clinical factors rather than genotype alone.

References

  1. Effects of CYP2R1 gene variants on vitamin D levels and status — pubmed.ncbi.nlm.nih.gov ↗
  2. Common Variants in CYP2R1 and GC Genes Predict Vitamin D ... — pmc.ncbi.nlm.nih.gov ↗
  3. Response to Antenatal Cholecalciferol Supplementation Is ... — academic.oup.com ↗
  4. Genetic and epigenetic determinants of vitamin D metabolism - PMC — pmc.ncbi.nlm.nih.gov ↗
  5. Genetic Variants Influencing Individual Vitamin D Status - PMC — pmc.ncbi.nlm.nih.gov ↗
  6. Liver vitamin D receptor, CYP2R1, and CYP27A1 ... — onlinelibrary.wiley.com ↗

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